Summer research project at Mount Allison University.
Wednesday, May 4, 2011
ImageJ Harder Image
Here is a run through with the harder image in order. All the junk becomes selected in one large block. Maybe some more can be done at a different step to pull it into smaller chunks.
Python is promising. My basic script for working with PIL to produce the html pages is in microscope pictures / zfinkel microscope files / image-processing / process.py
The code is not particularly good, but might have something useful in it.
I like Dan's comments-- - basic image processing - a few more tweaks - get out shape data -- perimeter, max "diameter", area, etc., and filter based on those - it might be worth learning about "cluster analysis" (hierarchical clusters) for working with the shape data
Looks like you are making a good start!
ReplyDeletePython is promising. My basic script for working with PIL to produce the html pages is in microscope pictures / zfinkel microscope files / image-processing / process.py
The code is not particularly good, but might have something useful in it.
I like Dan's comments--
- basic image processing
- a few more tweaks
- get out shape data -- perimeter, max "diameter", area, etc., and filter based on those
- it might be worth learning about "cluster analysis" (hierarchical clusters) for working with the shape data
Thanks for the updates -- keep 'em coming.